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RDP Release 10, Update 18 :: Jan 25, 2010 :: 1,358,426  16S rRNAs

link to new window with RDP's latest NAR article

The Ribosomal Database Project (RDP) provides ribosome related data and services to the scientific community, including online data analysis and aligned and annotated Bacterial and Archaeal small-subunit 16S rRNA sequences.


RDP Release 10 brings two major changes to the RDP:

  • RDP10 provides new Bacterial and Archaeal alignments with several significant enhancements over the previous RDP 9 alignments.

  • Use of the Infernal secondary-structure based aligner that provides better support for short partial sequences and handles certain sequencing artifacts in a more intuitive manner.

Explore our online analysis tools:


HOVER over any tool item in the menu to see a brief popup description of its features;

CLICK on the tool menu item to begin working with it.

 

cameraIconBe sure to view the video tutorials and visit each tool's help file to use our site to your fullest advantage.




Sponsors:

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Support:


Part of the RDP's mission is to provide support to our users. Email and phone contacts are available on the contacts page.



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News

02/03/2010 read more
The latest release of RDP Classifier 2.1 is freely available from sourceforge.

01/25/2010 read more
RDP 10, Update 18 Released. Hierarchy model used by RDP updated.

10/16/2009 read more
A 50% bootstrap cutoff is appropriate for short sequences, according to a recent publication.

06/02/2009 read more
Released myRDP SRA Prepkit beta to help prepare and manage the documents required for submitting Pyrosequencing data to Short Read Archive.

12/05/2008 read more
SOAP web services for Seqmatch and Classifier now available.

08/01/2008 read more
RDP 10, Update 2 Released. RDP Release 10 is now the latest official release of the Ribsomal Database Project II.

03/22/2007 read more
New video tutorials available in Flash, Quicktime and Windows Media formats.

03/05/2008 read more
RDP 9, Update 59 Released. This release includes a beta version of the new Taxomatic visualization tool.

03/23/2006 read more
Batch retrieval by GenBank accession numbers available.

02/02/2006 read more
RDP 9, Update 36 Released. ARB import help available.